Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFFRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKFYFLA-RLISQVSRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVFQGVTLGGTGKEKGKRHPTIKDDALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFSTVVGIPGRVVVQNGKKVRRDLNHQDLPDPVADRFKSLEQQILELKAELEDRKERINQK
1SST Chain:C ((80-240))
--------DIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFD-VDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTG----DRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140316 for 1296 contacts (-108.3/contact) +
2D Compatibility (PS) -17039 + (NN) -10756 + (LL) 4420
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -180541.0 ( -139.31 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1SST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SST-query.scw
PDB file :
Tito_Scwrl_1SST.pdb
: