Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFI-KKQGAIPSFKGYNGFRGSICVSVNEELVHGIPG-SRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
3D27 Chain:A ((3-246))
----KTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILT--
General information:
TITO was launched using:
RESULT:
Template:
3D27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86816 for 2103 contacts (-41.3/contact) +
2D Compatibility (PS) -26725 + (NN) -14776 + (LL) 964
1D Compatibility (HY) -22000 + (ID) 5650
Total energy: -155003.0 ( -73.71 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3D27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D27-query.scw
PDB file :
Tito_Scwrl_3D27.pdb
: