Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNTWKIYILAIVSFLVGTSEYIISGILDQIAH------TLGITLAAAGQLITIFSLVYALSTPVLMALTASM-DRRKLMMYALGLFVFGNVLAFVLP--GYGWFIAARIIMAMGAGVVVVTALTIAAKIASE--GKQGSAIATVVMGFTASLIIGVPLGRMIAVALGWKSVFGAIALLGLIAMVVIFFT-LPYTEGD--KPVPL-------LQQ-----------------------------------------------------LALFKKRKVAM----GLSITFFWLGGYSVAYTYLSPYLLNISGIN----GKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFT------LVGGMTLHIVTLILLSLVT----------HSYIGVLVILILWSFAAWSTGPTQQFHLATIEPE-MSGVLLSMNQSMMQFAMAVGAGIGGVFVEN--VSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ |
| 4W6V Chain:A ((19-493)) | -----PLSGLFLSEMWERFSFYGIRPLLILFMAATVFDGGMGLPREQASAIVGIFAGSMYLAALPGGLLADNWLGQQRAVWYGSILIALGHLSIALSAFFGNDLFFIGLVFIVLGTGLFKTCISVMVGTLYKPGDARRDGGFSLFYMGINMGSFIAPLLSGWLLRTHGWHWGFGIGGIGMLVALLIFRGFAIPAMKRYDAEVGLDSSWNKPT---GRWVTAIMAVVVVIIALISQGVIPINPVMIASLLVYVIAASVTLYFIYLFAFAKMSRKDRARLLVCFILLVSAAFFWSAFEQKPTSFNLFANDYTDRMVMGFEIPTVWFQSINALFIILLAPVFSWA---------PSSITKFVIGILCAAAGFAVMMYAAQHVLSSGGAGVSPLWLVMSILLLTLGELCLSPIGLATMTLLAPDRMRGQVMGLWFCASSLGNLAAGLIGGHVKADQLDMLPTLFARCSIALVICAAVLIL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -437724 for 3096 contacts (-141.4/contact) +
2D Compatibility (PS) -36745 + (NN) -7639 + (LL) 1928
1D Compatibility (HY) -16400 + (ID) 2450
Total energy: -499030.0 ( -161.19 by residue)
QMean score : 0.322
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