Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDNKTIEIIKSTVPVLQQHGETITGRFYDRMFQDHPELLNIFNQTNQKKKTQRTALANAVIAAAANIDQLGNIIPVVKQIGHKHRSIGIKPEHYPIVGKYLLIAIKDVLGDAATPDIMQAWEKAYGVIADAFIGIEKDMYEQAEEQAGGWKEYKPFVIAKKERESKEITSFYLKPEDSKPLPEFQAGQYISIKVRIPDSEYTHIRQYSLSDMPGKDYYRISVKKD-------GVVSSYLHDGLQEGDSIEISAPAGDFVLDHASQKDLVLISAGVGITPMISMLKTSVSKQPERQILFIHAAKNSEYHALRHEVEEAAK-HSAVKTAFVYREPTEEDRAGDLHFHEGQIDQQFLKELIANTDADYYICGSPSFITAMHKLVSELGSAPESIHYELFGPQLSLAQSV
4EH1 Chain:A ((2-237))--------------------------------------------------------------------------------------------------------------------------------------------------------DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDNPGLVSHYLHNNVKVGDSVKLYAPAGDFFYVE-RERPVVLISAGVGATPMQAILHTLAKQN-KSGVTYLYACNSAKEHTFAQETAQLIAQQGWM-QQVWYRDESA------DDVLQGEMQLAEL--ILPIEDGDFYLCGPIGFMQYVVKQLLALGVDKARIHYEVFGP--------


General information:
TITO was launched using:
RESULT:

Template: 4EH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1263 -152931 -121.09 -670.75
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -121.09
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_4EH1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EH1-query.scw
PDB file : Tito_Scwrl_4EH1.pdb: