Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKIKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKPNSQKITDAMTEKPVSVEEDASVDEVLHLMASHQ-LRRIPVTK-NKKLTGIVTLGDLSLSEQTNERAGSALSDISEGDNREEGFFH
2P9M Chain:A ((8-135))-IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD-ENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIHEDASILEAIKKMDIS-IINQLPVVDKNNKLVGIISDGDIIRTIS------------------------


General information:
TITO was launched using:
RESULT:

Template: 2P9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 545 -72307 -132.67 -597.57
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -132.67
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_2P9M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2P9M-query.scw
PDB file : Tito_Scwrl_2P9M.pdb: