Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGMEWFPLLGLANRARKVVSGEDLVIKEI--RNARAKLVLLTEDASSN-------TAKKVTDKCNYYKVPYKKVESRAVLGRSIGKE---------------ARVVVAVTDQGFANKLISLLD
2KG4 Chain:A ((19-134))-VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQ-------


General information:
TITO was launched using:
RESULT:

Template: 2KG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 349 -58597 -167.90 -636.92
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -167.90
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_2KG4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KG4-query.scw
PDB file : Tito_Scwrl_2KG4.pdb: