Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDSILFTVKNEHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLKERIKLKEDQVLESVSLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPRLIGRGKAKEFIYTGRRVTAHEAKEIGLVEHVTAPCDLMPKAEELAAAISANGPIAVRQAKFAINKGLETDLATGLAIEQKAYEQTIPTKDRREGLQAFQEKRRAVYKGI
2HW5 Chain:C ((39-284))---------KNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTG-GDKAFAAGADIKEMQNLSFQDCYSSKFL--KHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANFK--


General information:
TITO was launched using:
RESULT:

Template: 2HW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1199 -130070 -108.48 -528.74
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain C : 0.80

3D Compatibility (PKB) : -108.48
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_2HW5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HW5-query.scw
PDB file : Tito_Scwrl_2HW5.pdb: