Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIKIKYLDETQTRINKMEQGDWIDLRAAEDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIEVDRLGNGDRGGHGSTGTK
4AOZ Chain:C ((3-144))MQIKIKYLDETQTR---IEQGDWIDLRAAEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTEIKKGDRICQFRIMKKMPAVELVEVEHLGNEDRGGLGSTGTK


General information:
TITO was launched using:
RESULT:

Template: 4AOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 531 -64556 -121.57 -464.43
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain C : 0.98

3D Compatibility (PKB) : -121.57
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4AOZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AOZ-query.scw
PDB file : Tito_Scwrl_4AOZ.pdb: