Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDLHDERKL
4F3W Chain:B ((8-126))IDWKQLRDKATQVAAGAYAPYSRFPVGAAALVDDGRVVTGCNVENVSYGLALCAECGVVCALHATGGGRLVALACVDGRGAPLMPCGRCRQLLFEHGGPELLV--DHLAGPRR---LGDLLPEP------------


General information:
TITO was launched using:
RESULT:

Template: 4F3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 621 -67925 -109.38 -570.80
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -109.38
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_4F3W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F3W-query.scw
PDB file : Tito_Scwrl_4F3W.pdb: