Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMVLAFLGFLACLIALGYGLYHLVRYVLKKEKRFSKRLFWPLFIGGLVLLFTGAALAEPDTAAANAEKKYSALNAEYKNLTKEHEELEKEYKSVSSEAKKLKDNKEDQDKLEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDAKTAKAENETLRQDKTKLENQLKETESQTASSHEDTGSSSNNTSKSDETKTADKAEGCNIKGSRNGIYHTPGSTYYDRTTDPAEMFCSVEEAEAAGYRAPKR
2V66 Chain:B ((1-111))------------------------------------------------------------------AEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYK--QVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQ---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2V66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 6 202 33.58 1.82
target 2D structure prediction score : 0.85
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : 33.58
2D Compatibility (Sec. Struct. Predict.) : 0.85
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.790

(partial model without unconserved sides chains):
PDB file : Tito_2V66.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2V66-query.scw
PDB file : Tito_Scwrl_2V66.pdb: