Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKELQEHELD-HI-ED-DVYLLYLYTPFCGTCQLASKMLTVVKEMLP-DVAFYQNNVNYSPTFAKAYQIESVPCFLLFKGGKMVERGYAFHSVSYLYELIKQKSSSASHL
2O8V Chain:B ((5-107))-IHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL------


General information:
TITO was launched using:
RESULT:

Template: 2O8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 422 -20463 -48.49 -206.70
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -48.49
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.636

(partial model without unconserved sides chains):
PDB file : Tito_2O8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O8V-query.scw
PDB file : Tito_Scwrl_2O8V.pdb: