Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEEKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDVENYPGFESILGPELSNKMFEHAKKFGAEYAYGDIKEVID-GKEYKVVKAGSKEYKARAVIIAAGAEYKKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVVVGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKVDFLWNKTVKEIHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFENLGI-TNEEGYIETNDRMETKVEGIFAAGDIREKSL--RQIVTATGDGSIAAQSVQHYVEELQETLKTLK
3F8D Chain:C ((16-318))------FDVIIVGLGPAAYGAALYSARYMLKTLVIGE-TPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIEN--EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE---------


General information:
TITO was launched using:
RESULT:

Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1805 -62835 -34.81 -212.28
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain C : 0.81

3D Compatibility (PKB) : -34.81
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_3F8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8D-query.scw
PDB file : Tito_Scwrl_3F8D.pdb: