Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITESRQMLDKRNRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGEPLMRKD---MPELIKKLARIPGIRDIAMTTNGSLLP-VYAKRLKEAGLKRVTISLDSLEDERFKKING--RGVSVSKVLEGIEAAKQAGLG-VKINMVVQKGVNEKDILPMARYFKEKGHILRFIEFMDVGNTNQWEKKDVMTKAEIIDLINKHMPVEPIAPNYIGEVASRFRYLDGSGEIGVISSVSDAFCGSCNRARLSARGELFTCLFASSGFDLRAPVRQELSDDELSEMIGTVWKNRIDQYSVDRTLSKASGKKKVEMSYIGG
4RTB Chain:A ((98-293))----------------LFAPLYLSNICINNCSYCSFRRENKE-----LSRVRLSLEEAVDEAKAIR-EMGHTRILLVMGEEPEDKTLSYLEEIIPAIYSEVDI--RRINVNIAPLTLKGYERLKKLKIGTYQLFQESYNPEVYREVHLDGPKTNFLWRLNAVERAIEAGIDDIGIGALFGLGDPLFELLGVIAHADY-------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 766 -19565 -25.54 -117.86
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -25.54
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_4RTB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RTB-query.scw
PDB file : Tito_Scwrl_4RTB.pdb: