Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------MSEHQSLPAPEASTEVRVAIVGV-GNCASSLVQGVEYYYNADDTSTVPGL------------MHVRFGPYHVRDVKFVAAFDV----DAKKVGF--------DLSDAIFASENNTIKIADVAPTNVIVQ------------------------------------RGPTLDGIGKYYADTIELSDAEPVDVVQAL-----------KEAKVDVLVSYLPVGSEE--ADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLK-------REFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGG---------------PVIPASAYLMKSP------PEQLPDDIARAQLEEFIIG----------------- |
1JKI Chain:A ((9-533)) | ITSVKVVTDKCTYKDNELLTKYSYENAVVTKTASGRFDVTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLANKHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEAMQRSQVLEYDLQQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQRIRRDIQNFKEENALDKVIVLWTANTERYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFV-PGLVQLAEHEGTFIAGDDLKS--GQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFEERLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65453 for 2829 contacts (-23.1/contact) +
2D Compatibility (PS) -37720 + (NN) 975 + (LL) 236
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -117512.0 ( -41.54 by residue)
QMean score : 0.260
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