Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MNAVESTLRRVAKDLTGLRQRWALVGGFAVSARSEPRFTRDVDIVVAVANDDAAESLVRQLLTQQYHLLASVEQDAARRLAAVRLGATADTAANVVVDLLFASCGIEPEI-AEAAEEIEILPDLVAPVATTAHLIAMKLLARDDDRRPQDRSDLRALVDAAS-PQDIQDARKAIELITLRGFHRDRDLAAEWTRLAAKW
2EWR Chain:A ((14-169))
IRPEYLRVLRKIYDRLKNEKVNWVVTGSLSFALQGVPVEVHDIDIQTDEEGAYEIERIFSEFVSKKVRFSST--EKICSHFGELIID------------------GIKVEIMGDIRKRLE----------------------DGTWEDPVDLNKYKRFVETHGMKIPVLSLEYEYQAYLKLGRVEKAETLRKWLNERK--
General information:
TITO was launched using:
RESULT:
Template:
2EWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17179 for 1131 contacts (-15.2/contact) +
2D Compatibility (PS) -16197 + (NN) -3130 + (LL) 4652
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -39254.0 ( -34.71 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2EWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EWR-query.scw
PDB file :
Tito_Scwrl_2EWR.pdb
: