Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGAEV--------DITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVR--PHAKIIVAGSSAEYGFVDPSEVPINERREL---RPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGPRKVG-----DALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGEAGAD----YNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDP-----------------------------ALLRPTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV- |
| 1DB3 Chain:A ((1-357)) | SKVALITGVTGQDGSYLAEFLLEK-GYEVHGIKR---------------PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE--IPQKETTPFYPR---SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESP----RRGETFVTRKITRAIANIAQGLESCLYLGN-MDSLRDWGHAKDYVKMQWMMLQ-QE----QPEDFVIATGVQYSVRQFVEMAAAQLG--IKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE---AAKKHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187200 for 2307 contacts (-81.1/contact) +
2D Compatibility (PS) -30413 + (NN) -12681 + (LL) 824
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: -244520.0 ( -105.99 by residue)
QMean score : 0.502
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