Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVFSALLLAGVLSALALAVGGAVGMRLTSRVVEQRQRVATEWSGITVSQMLQCIVTLMPLGAAVVDT---HRDVVYLNERAKEL-GLVRDRQLDDQAWRAARQ------------AL-GGEDVEFDLSPRKRSATGRSGLSVHGHARLLSEEDRRFAVVFVHDQSDYARMEAA----------------RRDFVANVSHELKTPVGAMALLAEALLASAD-----DSETVRRFAEKVLIEANRLGDMVAELIELSRLQGAERLPNMTDVDVDTIVSEAISRHKVAADNADIEVRTDAPS-NLRVLGDQTLLVTALANLVSNAIAYSPRGSLVSISRR---RRGANIEIAVTDRGIGIAPEDQERVFERFFRGDKARSRATGGSGLGLAIVKHVAANHDGTIRVWSKPGTGSTFTLALPALIEAYHDDERPEQAREPELRSNRSQREEELSR |
| 4GCZ Chain:A ((13-373)) | ------------------------------------------------LEVIKKALDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKK---DGTMFWNELNIDPMEIEDKTYFVGIQNDITEHQQTQARLQELQSELVHVSRLSAMGEMASALAHELNQPLAAISNYMKGSRRLLAGSSDPNTPKVESALDRAAEQALRAGQIIRRLRDFVARGES----EKRVESLSKLIEEAGALGLAGAREQNVQLRFSLDPGADLVLADRVQIQQVLVNLFRNALEAMAQSQRRELVVTNTPAADDMIEVEVSDTGSGFQDDVIPNLFQTFFTTK------DTGMGVGLSISRSIIEAHGGRMWAESNASGGATFRFTLPAAD------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86277 for 2151 contacts (-40.1/contact) +
2D Compatibility (PS) -34713 + (NN) -20135 + (LL) 7552
1D Compatibility (HY) -9200 + (ID) 3100
Total energy: -145873.0 ( -67.82 by residue)
QMean score : 0.474
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