Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR-------------------------------GRADDTDDVILNRMKVYRDETAPLLEYY--RDQLKTVDAVGTMDEVFARALRALGK
4QBG Chain:B ((1-205))
MNIVLMGLPGAGKGTQAERIVAKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRKLEHVIHIEVRQEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVAKRLEVNMKQMAPLLAFYDSKEVLRNVNGQQDMEKVF---------
General information:
TITO was launched using:
RESULT:
Template:
4QBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63705 for 1300 contacts (-49.0/contact) +
2D Compatibility (PS) -18950 + (NN) -12785 + (LL) 876
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -116214.0 ( -89.40 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_4QBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBG-query.scw
PDB file :
Tito_Scwrl_4QBG.pdb
: