Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP---
3KP7 Chain:A ((1-151))
MVRRIEDHISFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSIEA-LTVGQITEKQGVNKAAVSRRVKKLLNAELVKLKI---------IKLSNKGKKYIKERKAIMSHIASDMTSDFDSKEIEKVRQVLEIIDYRIQSYTSKL
General information:
TITO was launched using:
RESULT:
Template:
3KP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39880 for 797 contacts (-50.0/contact) +
2D Compatibility (PS) -14906 + (NN) -8163 + (LL) 592
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -66907.0 ( -83.95 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_3KP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP7-query.scw
PDB file :
Tito_Scwrl_3KP7.pdb
: