Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGIAELTGARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVHIPGVGERLLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVAEIAFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVPGPGELSLGREMVDQINRVARQVIEAVG |
| 3F8K Chain:A ((5-136)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------IKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRIT------------EDHVTFLAEVDGKVVGEASLHKD------GEFSLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMRFYE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110141 for 925 contacts (-119.1/contact) +
2D Compatibility (PS) -13564 + (NN) -5165 + (LL) 14356
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: -121614.0 ( -131.47 by residue)
QMean score : 0.405
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