Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSLLPA-HPQLEVLQGDITDADVCAAAVD--GIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT-----------MFRKLFESVLK-GHVKVLV------GRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLF-TTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 4WOK Chain:A ((11-333)) | -------------ANNVLVVGGAGFIGSHTAKLLAGQGYAPVVYDNLSTGHQSAVRWGDFVEGDILDQARLVETMEKYAPVAVIHFAASAYVGESV----EDPAKYYRNNVGGTQSLLDACRLTRTQNVIFSSSCATYGVPSR-LPIGEGEAQN--PINPYGRTKLIAEHMLADYAVAYGLRYVALRYFNASGADIDGELGEKHDPETHLIPRAMMAAAGRLDVLEVYGDDYETPDGTCIRDYIHVTDLARAHVLAVEHLK--EAGGNLAVNLGTGRGTSIREIVQSIGRLTGRSVPV-----A--MR-------------A-RRA-------GDPPALYADPALAAEKLGFHTVYSDLDTIIRTAAPHFGLE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169098 for 2636 contacts (-64.1/contact) +
2D Compatibility (PS) -32312 + (NN) -14928 + (LL) 5244
1D Compatibility (HY) 0 + (ID) 2950
Total energy: -214044.0 ( -81.20 by residue)
QMean score : 0.453
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