Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MAGWFAHTLR-PAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAAVRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDRDGQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSISGDLRVDFPWLGTVVQAYLRRTLADC--------AELAAVGARVRLC-------KGAYDEPASVAYR-DAAQVTDSYLRCLRVLTAGRGY-PMVATHDPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFLRRLAER-PANLAFFLRALTDRRRARGCAER------------------------------ |
| 4TXA Chain:A ((6-399)) | PQWTDFLSCPICTQTFDETIRKPISLGCGH-----TVCKMCLNKLH--RKACPFDQTTINTDI-ELLPVNSALLQLVGLCSGVEDTKHYEEAKKCVEELALYLKPVLS------RPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELI---LQHQNPQQLSSNLWAAVRAR-GCQFLGPARQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDSSLMQLKEEFRTYEALRREHDSQIVQIAME---AGLRIAPDQWSSLLYGDQSH-KSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39897 for 2112 contacts (-18.9/contact) +
2D Compatibility (PS) -31800 + (NN) -338 + (LL) 1976
1D Compatibility (HY) -4400 + (ID) 2900
Total energy: -77359.0 ( -36.63 by residue)
QMean score : 0.112
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