Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATSKVERLVNLVIALLSTRGYITAEKIRSSVAGYSDSPSVEAFSR---MFERDKNELRDLGI-------------PLEVGRVSALEPTEGYRINRD--AYALSP-----VELTPDEAAAVAVAT--------QLWESPELITATQGALLKLRAAGVDVDPLD--------------TGAPVAIASAAAVSGLRGSEDVLGILLSAIDSGQVVQFSHRSSRAEPYTVRTVEPWGVVTEKGR--WYLVGHDRDRDATRVFRLSRIGAQVTPIGPAGATTVPAGVDLRSIVAQKVTEVPTGEQAT------VWVAEGRATALRRAGRSAGPRQLGGRDGEVIELEIRSSDRLAREITGYG--ADAIVLQPGSLRDDVLARLRAQAGALA----- |
| 4JP0 Chain:A ((2-381)) | LDTNKVYEISNHANGL-YAATYLSLDDSGVSLMNKNDDD-IDDYNLKWFLFPIDDDQYIITSYAANNCKVWNVNNDKINVSTYSSTNSIQKWQIKANGSSYVIQSDNGKVLTAGTGQALGLIRLTDESSNNPNQQWNLTSVQTIQLPQKPIIDTKLKDYPKYSGNIDNGTSPQLMGWTLVPCIMVNDPNIDKNTQIKTTPYYILKKYQYWQRAVGSNVALRPHEKKSYTYE-WGTEIDQKTTIINTLGFQINIDSGMKFDIPEVGGGTDEIKTQLNEELKIEYSHETKIMEKYQEQSEIDNPTDQSMNSIGFLTITSLELYRYNGS-----------EIRIMQIQTSDNDTYNVTSYPNHQQALLLLTNHSYEEVEEITNIPKSTLIKLKKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36207 for 2272 contacts (-15.9/contact) +
2D Compatibility (PS) -31981 + (NN) 10392 + (LL) -256
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -69002.0 ( -30.37 by residue)
QMean score : 0.121
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