Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSEQTIYGANTPGGSGPRTKIRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGD-AAEQTIADAIAVAEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQEVAGGVFPADEHSF
3VAV Chain:A ((13-275))-----------------RPAVTVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGT-PADAFASAVKLM-RAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFG---VQGKTEAGAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTRELSIPTIGIGAGAECSGQVLVLHDMLGVFPGKRPRFVKDFMQGQPSIFAAVEAYVRAVKDGSFPGPEHSF


General information:
TITO was launched using:
RESULT:

Template: 3VAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -206217 for 2339 contacts (-88.2/contact) +
2D Compatibility (PS) -28533 + (NN) -12878 + (LL) -176
1D Compatibility (HY) -22400 + (ID) 5900
Total energy: -276104.0 ( -118.04 by residue)
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3VAV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VAV-query.scw
PDB file : Tito_Scwrl_3VAV.pdb: