Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MSAAGVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYRRCSEHHHHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIFGTCSDCRS
1MZB Chain:A ((3-136))
MVENSELRKAGLKVTLPRVKILQMLDSAQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLYVRKKK---
General information:
TITO was launched using:
RESULT:
Template:
1MZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38473 for 816 contacts (-47.1/contact) +
2D Compatibility (PS) -14371 + (NN) -9384 + (LL) 128
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -72900.0 ( -89.34 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1MZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZB-query.scw
PDB file :
Tito_Scwrl_1MZB.pdb
: