Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEGSRRPSGMLMSVDLEPVQLVGPDGTPTAERRYHRDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWLFPQYRELGVYLVRGIP--------PGHVGVAWRGTW---HGGLQFTTKCCAPMSVPIGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRWATLD-PIPRYRTYLQDQGLWSQRLEEQVTARAKHVRSELRDAVFDA---PDFDVDEVFTTVYAEITPGLQAQREQLRAELARTD |
2BFE Chain:A ((42-385)) | --------------------QIINPSEDP--------HLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGAAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCK--ERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIG-HST-------------------DHPISRLRHYLLSQGWWD---EEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145759 for 2492 contacts (-58.5/contact) +
2D Compatibility (PS) -34476 + (NN) -22888 + (LL) 3448
1D Compatibility (HY) -19200 + (ID) 6450
Total energy: -225325.0 ( -90.42 by residue)
QMean score : 0.388
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