Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFG---FADCIDL--LANYTALCIDEFELDDPG-NTTLISRLLSALV----ERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP |
4WW0 Chain:A ((49-203)) | ------------------------------------------------------------------------------------------------RPPKGVLLYGEPGVGKTLLAKAIAGEAH--------VPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCMIFIDEIDAVGR-EREQTLNQLLVEMDGFDTSDGIIVIAATNRP----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -46989 for 627 contacts (-74.9/contact) +
2D Compatibility (PS) -10288 + (NN) -4265 + (LL) 18364
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -46278.0 ( -73.81 by residue)
QMean score : 0.277
|
|
|