Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
4CO5 Chain:A ((1-108))
MKLVMAIIKPFKLDEVREALTSLGIQGLTVSEVKGFG----QTEIYRGAEYSVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVRIRTGETN----
General information:
TITO was launched using:
RESULT:
Template:
4CO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62666 for 639 contacts (-98.1/contact) +
2D Compatibility (PS) -11501 + (NN) -2058 + (LL) 400
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -90675.0 ( -141.90 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_4CO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CO5-query.scw
PDB file :
Tito_Scwrl_4CO5.pdb
: