Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRV---PCLPSDRLLNLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAYRAIKPYLI--TSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFW-HEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMFTR
4YSX Chain:B ((33-266))
--------------------KRIKTFEIYRFNPEEP---GAKPKLQKFDVDLDKC--GTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAGENTLAC------ICNIDQNTSKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPWLQKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSASCPSYWWNADKYLGPAVLMQAYRWIIDSRDDSAAERLARMQDGFSAFKCHTIMNCTKTCPKHLNPARAIGEIKMLL----
General information:
TITO was launched using:
RESULT:
Template:
4YSX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138058 for 1756 contacts (-78.6/contact) +
2D Compatibility (PS) -24858 + (NN) -18022 + (LL) 1520
1D Compatibility (HY) -20800 + (ID) 4850
Total energy: -205068.0 ( -116.78 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_4YSX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YSX-query.scw
PDB file :
Tito_Scwrl_4YSX.pdb
: