Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTPTGSRRIFSGVQPTSDSLHLGNALGAVAQWVGLQD-DHDAFFCVVDLHAITIP-QDPEALRRRTLITAAQYLALGIDPGRATIFVQSQVPAHTQLAWVLGCFTGFGQASRMTQFKDKSARQGSEATTVGLFTYPVLQAADVLAYDTELVPVGEDQRQHLELARDVAQRFNSRFPGTLVVPDVLIPKMTAKIYDLQDPTSKMSKSAGTDAGLINLLDDPALSAKKIRSAVTDSERDIRYDPDVKPGVSNLLNIQSAVTG--TDIDVLVDGYA--GHGYGDLKKDTAEAVVEFVNPIQARVDELTADPAELEAVLAAGAQRAHDVASKTVQRVYDRLGFLL |
| 2G36 Chain:A ((12-339)) | ------HMRILSGMRPT-GKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI------DLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSR-VPKLPGT-DG-RKMSKSYG---NIINLEISEKELEQTILRMMTDPARVRRSD-PGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148149 for 2460 contacts (-60.2/contact) +
2D Compatibility (PS) -34429 + (NN) -17960 + (LL) 616
1D Compatibility (HY) -24800 + (ID) 5300
Total energy: -230022.0 ( -93.50 by residue)
QMean score : 0.556
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