Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGHPGIVAPPAMIQVWTMMGLGGVRPKDDPLGPIIKLFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELGDVVGPKQTALGEGWFINQHIVWQVGD-EDVAEMNWRILKFKPAGSPSSVPDDLDPDAMMRPSSSRDTAFFWDGVKAHELRIQRLADGSLRHPPVPAVWQDKSVPINYVVSSGRGTVFSFVVHHAPKVPGRTVPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFPDWSLYAWEPDE |
| 5CPG Chain:A ((12-143)) | -------------EVGQKA-E---YTSSIAERDLQLFAAVSGDRNPVHLDAAYAATTQFKERIAHGMLSGALISAAIA----------T----V--LPGPGTIYLGQTLRFTRPVKLGDDLKVELEVLEKLPK--------NRVRMATRVFNQAGKQVVDGEAEIMAPEEKLS------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77584 for 939 contacts (-82.6/contact) +
2D Compatibility (PS) -14178 + (NN) -4437 + (LL) 9696
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -86103.0 ( -91.70 by residue)
QMean score : 0.369
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