Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG--HRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVD-ANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
1INI Chain:A ((4-228))
---THLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAG---DAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGA--TITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLT-
General information:
TITO was launched using:
RESULT:
Template:
1INI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133870 for 1827 contacts (-73.3/contact) +
2D Compatibility (PS) -24375 + (NN) -11886 + (LL) 640
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -183791.0 ( -100.60 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_1INI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1INI-query.scw
PDB file :
Tito_Scwrl_1INI.pdb
: