Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAPRCQKVLEGTGFVIS--PDRVMTNAHVVAGSNNVTVYAG-DKPFEATVVSYDPSVDVAILAVPHL-PPPPLVFAAE-PAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGEVAGQLAKIGATQPVGTGACVS |
| 3STJ Chain:A ((15-232)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAPMLEKVLPAVVSVRVEGT-QPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL-----NL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112527 for 1654 contacts (-68.0/contact) +
2D Compatibility (PS) -20732 + (NN) -9262 + (LL) 16892
1D Compatibility (HY) -6000 + (ID) 2050
Total energy: -133679.0 ( -80.82 by residue)
QMean score : 0.409
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