Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLGPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLTDHTFDLYAMLATVT---DRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMR---PDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVVA-ERARVSAELRAAGFTLPPSQANFVWLPLGS-RTQDFVEQAADARIVVRP---YGTDGVRVTVAAPEENDAFLRFARRWRSDQ |
| 3GET Chain:A ((28-364)) | -------------------GVKEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKY--KVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSI--THNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAMDD-DEFTEKTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYGLNAIRITIGTSYENEKFFTEFDKIL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -250515 for 2748 contacts (-91.2/contact) +
2D Compatibility (PS) -36128 + (NN) -22780 + (LL) 972
1D Compatibility (HY) -20800 + (ID) 4550
Total energy: -333801.0 ( -121.47 by residue)
QMean score : 0.623
|
|
|