Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRT--YRQAVTAAGSGCAAAIDAERWLAEHAATGEADSTDALIGAQR |
3F8P Chain:B ((17-319)) | ---------------DVIIVGLGPAAYGAALYSARYMLKTLVI-GETPGGQLTEAGIVDDYLGLIE-IQASDMIKVFNKHIEKYEVPVLLDIVEKIE----EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215675 for 2605 contacts (-82.8/contact) +
2D Compatibility (PS) -31334 + (NN) -5841 + (LL) 1440
1D Compatibility (HY) -25200 + (ID) 5650
Total energy: -282260.0 ( -108.35 by residue)
QMean score : 0.555
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