Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFALLRAREPAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDNRSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFYLRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLDDAAKRAGKAAEFQRLRREYAALSQREWGGESPFKAWIDAPFNNAKLLPFGLYDQWVAAFAVLFRQVGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP |
3SJA Chain:C ((1-61)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNELSKKYLAKVKERHELKEFNNSI--SAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENHH-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16866 for 323 contacts (52.2/contact) +
2D Compatibility (PS) -7399 + (NN) -8595 + (LL) 24264
1D Compatibility (HY) 800 + (ID) 350
Total energy: 25586.0 ( 79.21 by residue)
QMean score : 0.496
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