Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSLKGMAIFATVVDKGSMAAAAQSLGMTPSAVSQQIRKLESRAQVTLLHRTTRRLTLTEAGEAFYRSCAQMLAIAEEAERRLGEWRDAPVGELRLAAPVGFSGTLITQALKPLLENHRQLRLQLFFQDERIDLVAERIDLAIRVGNLADSSLVARHLGDWS-SVLCAAPAYLRQRAPINRPEQLTEVDWISLNTSNHLNHL-TLSGPGGEVCKLRLEPRV-AANGMLA-VRQFTLD-GLGVSYQPLPE-VRDALNDGRLQQLLPEWRIPGLGIYAVTPRREAQPAKV-KVAIEALRRAFATDGDERWS |
| 3KOS Chain:A ((11-210)) | ------------------------------------------------------------------------------------------QEKLKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAWHDTDAQYLCSALMSPLCSPTLA----SQIQTPADILKFPLLRSYRRDEWALWMQTVGEA----PPSPTHNVMVFDSSVTMLEAAQAGMGVAIA---PVRMFTHLLSSERIVQPFL--TQIDLGSYWITRLQSRPETPAMREFSRWLTGVLHKT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139652 for 1459 contacts (-95.7/contact) +
2D Compatibility (PS) -19966 + (NN) -4826 + (LL) 9088
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -161706.0 ( -110.83 by residue)
QMean score : 0.340
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