Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIDLLDNLLFAMVRTGTPLLLVALGELVCERSGVLNLGQEGMMLFGAVIGFMVAFSSGSLWLGVLLAVLAGMLLAALFAGVALYLNANQVACGLALTIFGV---GLASFVGAAWVGKPLQGFAPLALPVLGELPLLGRMLFAQDALVYLSLALFAAVAWMLLRS--RAGLVLQAVGENPDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTP---MWAENMTAGRGWIALALVVFASWRVLRVL-LGAWLFGLASILHLVAQGVGLSIPANLLAMLPYAATILVLVLLSRDALRTRLYAPVSLGQPWKAGH------------------------- |
| 4COS Chain:A ((6-319)) | ----RNDFYCWVCHREGQVLC-CELCPRVY-HAKCLRLTSE---------------PEGDWFCPECEKITVAECIETQSKAMTM-LTIEQLSYLLKFAIQKMKQPGTDAFQKP----VPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWA-KLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSP--FRTPYTPNSQYQMLLDPTNPSAGTAKIDQEKVKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4COS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250978 for 2006 contacts (-125.1/contact) +
2D Compatibility (PS) -28249 + (NN) 301 + (LL) 2776
1D Compatibility (HY) -9600 + (ID) 2150
Total energy: -287900.0 ( -143.52 by residue)
QMean score : 0.223
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