Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQ---------DERAA------AALELTHNW-----DRDGYTQGD----GYGHLAIEVEDAAVTCARARALGYRVTREA--GLMQHGRSVIAFLEDPDGYKVELIQKGTQFD
3W0T Chain:B ((37-181))
----QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPDGYWIEILNPNKMAT
General information:
TITO was launched using:
RESULT:
Template:
3W0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54155 for 786 contacts (-68.9/contact) +
2D Compatibility (PS) -13086 + (NN) -4306 + (LL) 780
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -86567.0 ( -110.14 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_3W0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W0T-query.scw
PDB file :
Tito_Scwrl_3W0T.pdb
: