Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIA----NTRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATCA---AAYRDAL---------PDSVEPEEGRRIE-PPRC--PACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG
4UTN Chain:B ((13-274))
LTAFREHFAKAKHIAIITGAGVSAESGVPTFRGP-GGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMECTPATQRFKYHFEGPCGSTLPPALE-----
General information:
TITO was launched using:
RESULT:
Template:
4UTN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135091 for 1956 contacts (-69.1/contact) +
2D Compatibility (PS) -26579 + (NN) -16999 + (LL) 512
1D Compatibility (HY) -16000 + (ID) 5200
Total energy: -199357.0 ( -101.92 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_4UTN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UTN-query.scw
PDB file :
Tito_Scwrl_4UTN.pdb
: