Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
4B0C Chain:B ((2-171))
-TKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
General information:
TITO was launched using:
RESULT:
Template:
4B0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127362 for 1325 contacts (-96.1/contact) +
2D Compatibility (PS) -17993 + (NN) -8868 + (LL) 208
1D Compatibility (HY) -25200 + (ID) 8500
Total energy: -187715.0 ( -141.67 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_4B0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B0C-query.scw
PDB file :
Tito_Scwrl_4B0C.pdb
: