Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYES--YYDHFGQMDILSDGSLYLIYRRATEHVGGSD----GRVVFSKL---------------EGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYETGEVK--VYVSDDSGVTWVH-KFTLARGGADYNFAHGKSFQVGARYVIPLYAATGVNYELKWLESSDGGETWGEGSTIYSGNT--PYNETSYLPV-------GDGVILAVARVGSGAGGALRQFISLD-DGGTWTDQGNVTAQNGDSTDILVAPSLSYIYSEGGTPHVVLLYTNR-------TTHFC----YYRTILLAKAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETS--STTSGAYQFEVYLGGVPDFESDW---------FSVSSNSLYTLSHGLQRSPRRVVVE--------FARSSSPSTWNIVMPSYFNDGGHKGSGAQVEV--GSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI----------- |
| 3KF3 Chain:A ((1-509)) | LSVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEHDNEGIFSGSIVVDHNNTSGFFN--SSIDPNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDVSSNQFRDPKVFWHEDSNQWIMVVSKSQEYKIQIFGSANLKN-WVLNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPGSPLGGSINQYFVGDFDGFQFVPDDSQTRFVDIGKDFYAFQTFS---EVEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLNVSPGKTHFDILINSQELNSSVDSIKIGFDSSQSSFYIDRHIPNVEFPRKQFFTDKLAAYLEPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKYPHDIQIVTDTEEPLFELESVIIRELNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125067 for 3365 contacts (-37.2/contact) +
2D Compatibility (PS) -47609 + (NN) -25185 + (LL) 776
1D Compatibility (HY) -4000 + (ID) 3150
Total energy: -204235.0 ( -60.69 by residue)
QMean score : 0.238
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