Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKNNLRYALGALALSVSAASLAAPSEAQQFTEFWTPGKPNPSICKSPLLVSTPLGLPRCLQASNVVKRLQKLEDIASLNDGNRAAATPGYQASVDYVKQTLQKAGYKVSVQPFPFTAYYPKGPGSLSATVPQPVTYEWEKDFTYLSQTEAGDVTAKVVPVDLSLGAGNTSTSGCEAEDFANF-PAGSIALIQRGTCNFEQKAENAAAAGAAGVIIFNQGNTDD------RKGLENVTVGESYEGGIPVIFATYDNGVAWSQTPDLQLHLVVDV-VRKKTETYNVVAETRRG----NPNNVVMVGAHLDSVFEGPGINDNGSGSAAQLEMAVLLAKALPVNKVRFAWWGAEEAGLVGSTHYVQNLAPEEKKKIKAYLNFDMIGSPNFGNFIYDGDGSDFGLQGPPGSAAIERLFEAYFRLRGQQSEGTEIDFRSDYAEFFNSGIAFGGLFTGAEGLKTEEQAQKYGGTAGKAYDECYHSKCDGIANINQDALEIHSDAMAFVTSWLSLSTKVVDDEIAAAGQKAQSRSLQMQKSASQIERWGHDFIK |
| 2EK8 Chain:A ((5-402)) | -----------------------------------------------------ADHQITKRTDAENMYNTIQFLS------QAPRVAGSPEELKAVRYIEQQFKSYGYHVEVQPFQFEGYTAPSEVTLKIGTE--KKE-----GEAFTYS---------PNSDVTAELVYVG-LGT-TADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR-------AGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKLKTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDG--------KKNRVTDLGAAASSRLSG-VLPYGQEGRSDHESFHALGIPAALFIHAP-------------------VEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARP-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111641 for 3538 contacts (-31.6/contact) +
2D Compatibility (PS) -41843 + (NN) -17445 + (LL) 8384
1D Compatibility (HY) -7600 + (ID) 5150
Total energy: -175295.0 ( -49.55 by residue)
QMean score : 0.452
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