Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFALIGAAGYIAPR-HMRAIKDT-GNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVH-------FTSEYKAAGYLEYEQARVRWFLSVDANDLP----ESVKGKKPTYR-----S--ITV---------------------NGE---E---MEFSEGFTDLHTTSYEEILAGRGY--GIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
| 3KUX Chain:A ((7-344)) | KIKVGLLGYG-YASKTFHAPLIMGTPGLELAGVSSSDASKVH--ADWPAIPVVSDPQMLFN---------DPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYFESHFDRYRPE-IRQRWREQ---GGGIWYDLGPHLLDQALQLFGLPETLNVDLGMLRPGSQSVDYFHAVLSYPGQRVVLHSTVLAAAETARYIVHGTQGSYIKFGVDPQEDRLKAGERLPQADWGYDMRDGIVTLSHDNVLTEKPLLTLPGNYPAYYAGIRDAIWGTAPNPVPATEAIKVMELIELGIASDQQKK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153772 for 2202 contacts (-69.8/contact) +
2D Compatibility (PS) -29991 + (NN) -1473 + (LL) 1136
1D Compatibility (HY) -2400 + (ID) 2400
Total energy: -188900.0 ( -85.79 by residue)
QMean score : 0.368
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