Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQHRLAAAIALVGLVLSGCDSQTNVELKTPAQKASYGIGLNMGKSLSQEGMDDLDSKAVAKGIEDALGKKKQQLTDEELTEAFAFLQKRAEERMAAIGDENAKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQ-PKATDVVTVHYEGRLTDGTVFDSSIERGSPIDLPVSG--VIPGWVEALQLMHVGEKIKLYIPSELAYGAQSPSPAIPANSVLVFDMELLGIKDPSKPDAEPEAGAAAQPEAKADAKK |
1J4R Chain:D ((1-104)) | ----------------------------------------------------------------------------------------------------------------------------GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60783 for 737 contacts (-82.5/contact) +
2D Compatibility (PS) -10575 + (NN) -2077 + (LL) 9196
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -74039.0 ( -100.46 by residue)
QMean score : 0.657
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