Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNRMMITGAGSGLGREIALRWARDGWRLALADVNEAGLAESLKLVREAGGDGFTQRCDV---RDYSQLTALAQSCEEKFGGIDVIVNNAGVASGGFFGELSLEDWDWQ--IAINLIGVVKGCKAFL-PLLERSKGKIVNIASMAALMQGPAMSNYNVAKAGVVALSESLLVELALVEVGVHVVCPSFFQTNLLDSFRGPSPEMKHQVGKLLESSPISAADIADYIHAEVAKGSFLILPHEQARMAWRIKQQNPQAIYDEMTAMAGKMQAKRQRQA
4URE Chain:B ((9-195))
-----LVTGAGNGIGRTIALTYAAEGANVVVSDISDEWGRETLALIEGKGGKAVFQHADTAHPEDHDELIAAAKRA---FGRLDIACNNAGI-SGEFTPTAETTDAQWQRVIGINLSGVFYGVRAQIRAMLETGGGAIVNISSIAGQIGIEGITPYTAAKHGVVGLTKTVAWEYGSKGIRINSVGPAFINTTLVQN--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4URE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123757 for 1490 contacts (-83.1/contact) +
2D Compatibility (PS) -19242 + (NN) -4021 + (LL) 7368
1D Compatibility (HY) -11600 + (ID) 3350
Total energy: -154602.0 ( -103.76 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_4URE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4URE-query.scw
PDB file :
Tito_Scwrl_4URE.pdb
: