Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRSPLFSQFPLHERLLKALESLSFSEPTPVQAAAIPKAL--EGHDLRVTAQTGSGKTAAFLLPLLHRLL-AEDKPRSLARALILLPTRELAQQTLKEVERFAQFTF---IKACL-ITGGEDFKVQGARLRK-NPEIIIGTPGRLLEQ-RNAGNLPLQDIEVLVLDEADRMLDMGFADD------VLALANACPAER-QTLLFSATHSGAGLNKVIAEVLREPQVLRLNQVG----ELNENVRQQVITADDVAHK-----EQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIANQHK----VFVLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE |
| 3SQX Chain:A ((28-407)) | -----------LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDK-VQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPT-VKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELE---------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142585 for 2884 contacts (-49.4/contact) +
2D Compatibility (PS) -38965 + (NN) -28634 + (LL) 4788
1D Compatibility (HY) -30400 + (ID) 6100
Total energy: -241896.0 ( -83.88 by residue)
QMean score : 0.496
|
|
|