Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRHFLSFMDYSPEELIGLIRRGSELKDLRNRGVLYEPLKSRVLGMVFEKASTRTRLSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVMIRTFAHATLTEFAAHSKVPVINGLSDDLHPCQLLADMQTFHEHRGSIQGK-----TVAWIGDG-NNMCNSYIEAALKFDFQLRVACPEGYEPKAEFV----ALA---GDRLRVVRDPREAVAGAHLVSTDVWASMGQEDEA-AARIALFRPYQVNAALLDGAAD-DVLFMHCLPA------------------HRGEEISEELLDDPRSVAWDQAENRLHAQKALLELLIEHAHYA |
| 1DUV Chain:I ((6-327)) | ---KHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEH---LPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVM---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147315 for 2470 contacts (-59.6/contact) +
2D Compatibility (PS) -31628 + (NN) -17768 + (LL) 1504
1D Compatibility (HY) -24800 + (ID) 6100
Total energy: -226107.0 ( -91.54 by residue)
QMean score : 0.498
|
|
|