Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPLTLIATITAAPGHAEALERELRALVAPSRAEAGCLQYDLHQDR--------HDSHLFYMIEQWRDDAALERHQNTEHFLRFSRGNEALLQNVKIDQLYRLA
1R6Y Chain:A ((1-103))
-MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQPG-
General information:
TITO was launched using:
RESULT:
Template:
1R6Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28048 for 628 contacts (-44.7/contact) +
2D Compatibility (PS) -10425 + (NN) -2757 + (LL) 352
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -45578.0 ( -72.58 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1R6Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R6Y-query.scw
PDB file :
Tito_Scwrl_1R6Y.pdb
: