Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAHTPSAPLAEVYDVAVVGGGINGVGIAADAAGRGLSVFLCEQHDLAQHTSSASSKLIHGGLRYLEHYEFRLVREALAEREVLLAKAPHIVKPLRFVLPHRP-HLRPAWMIRAGLFLYDHLGKREKLPASRGLRFTG---SSPLK-A-EIRRGF-EYSDCAVDDARLVVLNAISAREHGAHVHTRTRCVSARRSKG-LWHLHLERSDGSLYSIRARALVNAAGPWVARFIQDDLKQKSPYGIRLIQGSHIIVPKLYEG-EHAYILQNEDRRIVFAIPYLDRFTMIGTTDREYQGDPAKVAISEEETAYLLQVVNAHFKQQLAAADILHSFAGVRPLCDDESDEPSAITRDYTLSLSAGNGEPPLLSVFG--G-KLTTYRKLAESALTQLQPFFANLGPAWTAKAPLPGGEQMQSVEALTEQLANRYAWLDRELALRWARTYGTRVWRLLDGVNGEADLGEHLGGGLYAREVDYLCKHEWAQDAEDILWRRSKLGLFLSPSQQVRLGQYLQSEHPHRPRVHAA |
| 1Y56 Chain:B ((2-356)) | ----------LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQF--NDEANVRVMKRSVELWKKYSEEYGFSFKQTGYLFLLYDDEEVKTFK-----RNIEIQN-KFGV-PTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTN---K--GIIKTGIVVNATNAWANLINAMAGIK-TKIPIEPYKHQAVITQPIKRGTINPMVIS-FKYGHAYLTQTFHGGIIGGIGYEIGP--TYDLTPTYEFLREVSYYFTKIIP-ALKNLLILRTWAGYYAKTPDSNP---------AIGRI--EELNDYYIAAGFSGHGFMMAPAVGEMVAELITKGK--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186240 for 2986 contacts (-62.4/contact) +
2D Compatibility (PS) -36789 + (NN) -14113 + (LL) 10100
1D Compatibility (HY) -4800 + (ID) 2450
Total energy: -234292.0 ( -78.46 by residue)
QMean score : 0.390
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